13.3 Breathing
Doing the ‘Fly
The swimmer in the Figure 13.3.1 photo is doing the butterfly stroke, a swimming style that requires the swimmer to carefully control his breathing so it is coordinated with his swimming movements. Breathing is the process of moving air into and out of the lungs, which are the organs in which gas exchange takes place between the atmosphere and the body. Breathing is also called , and it is one of two parts of the life-sustaining process of respiration. The other part is gas exchange. Before you can understand how breathing is controlled, you need to know how breathing occurs.
How Breathing Occurs
Breathing is a two-step process that includes drawing air into the lungs, or inhaling, and letting air out of the lungs, or exhaling. Both processes are illustrated in Figure 13.3.2.
Inhaling
Inhaling is an active process that results mainly from contraction of a muscle called the diaphragm, shown in Figure 13.3.2. The is a large, dome-shaped muscle below the lungs that separates the (chest) and cavities. When the diaphragm contracts it moves down causing the thoracic cavity to expand, and the contents of the abdomen to be pushed downward. Other muscles — such as intercostal muscles between the ribs — also contribute to the process of , especially when inhalation is forced, as when taking a deep breath. These muscles help increase thoracic volume by expanding the ribs outward. The increase in thoracic volume creates a decrease in thoracic air pressure. With the chest expanded, there is lower air pressure inside the lungs than outside the body, so outside air flows into the lungs via the respiratory tract according the the pressure gradient (high pressure flows to lower pressure).
Exhaling
Exhaling involves the opposite series of events. The diaphragm relaxes, so it moves upward and decreases the volume of the thorax. Air pressure inside the lungs increases, so it is higher than the air pressure outside the lungs. , unlike inhalation, is typically a passive process that occurs mainly due to the elasticity of the lungs. With the change in air pressure, the lungs contract to their pre-inflated size, forcing out the air they contain in the process. Air flows out of the lungs, similar to the way air rushes out of a balloon when it is released. If exhalation is forced, internal intercostal and abdominal muscles may help move the air out of the lungs.
Control of Breathing
Breathing is one of the few vital bodily functions that can be controlled consciously, as well as unconsciously. Think about using your breath to blow up a balloon. You take a long, deep breath, and then you exhale the air as forcibly as you can into the balloon. Both the inhalation and exhalation are consciously controlled.
Conscious Control of Breathing
You can control your breathing by holding your breath, slowing your breathing, or , which is breathing more quickly and shallowly than necessary. You can also exhale or inhale more forcefully or deeply than usual. Conscious control of breathing is common in many activities besides blowing up balloons, including swimming, speech training, singing, playing many different musical instruments (Figure 13.3.3), and doing yoga, to name just a few.
There are limits on the conscious control of breathing. For example, it is not possible for a healthy person to voluntarily stop breathing indefinitely. Before long, there is an irrepressible urge to breathe. If you were able to stop breathing for a long enough time, you would lose consciousness. The same thing would happen if you were to hyperventilate for too long. Once you lose consciousness so you can no longer exert conscious control over your breathing, control of breathing takes over.
Unconscious Control of Breathing
Unconscious breathing is controlled by in the and of the brainstem (see Figure 13.3.4). The respiratory centers automatically and continuously regulate the rate of breathing based on the body’s needs. These are determined mainly by blood acidity, or . When you exercise, for example, carbon dioxide levels increase in the blood, because of increased cellular respiration by muscle cells. The carbon dioxide reacts with water in the blood to produce carbonic acid, making the blood more acidic, so pH falls. The drop in pH is detected by in the medulla. Blood levels of oxygen and carbon dioxide, in addition to pH, are also detected by chemoreceptors in major arteries, which send the “data” to the respiratory centers. The latter respond by sending nerve impulses to the , “telling” it to contract more quickly so the rate of breathing speeds up. With faster breathing, more carbon dioxide is released into the air from the blood, and blood pH returns to the normal range.
The opposite events occur when the level of carbon dioxide in the blood becomes too low and blood pH rises. This may occur with involuntary hyperventilation, which can happen in panic attacks, episodes of severe pain, asthma attacks, and many other situations. When you hyperventilate, you blow off a lot of carbon dioxide, leading to a drop in blood levels of carbon dioxide. The blood becomes more basic (alkaline), causing its pH to rise.
Nasal vs. Mouth Breathing
Nasal breathing is breathing through the nose rather than the mouth, and it is generally considered to be superior to mouth breathing. The hair-lined nasal passages do a better job of filtering particles out of the air before it moves deeper into the respiratory tract. The nasal passages are also better at warming and moistening the air, so nasal breathing is especially advantageous in the winter when the air is cold and dry. In addition, the smaller diameter of the nasal passages creates greater pressure in the lungs during exhalation. This slows the emptying of the lungs, giving them more time to extract oxygen from the air.
Feature: Myth vs. Reality
Drowning is defined as respiratory impairment from being in or under a liquid. It is further classified according to its outcome into: death, ongoing health problems, or no ongoing health problems (full recovery). Four hundred Canadians die annually from drowning, and drowning is one of the leading causes of death in children under the age of five. There are some potentially dangerous myths about drowning, and knowing what they are might save your life or the life of a loved one, especially a child.
| Myth | Reality |
|---|---|
| “People drown when they aspirate water into their lungs.” | Generally, in the early stages of drowning, very little water enters the lungs. A small amount of water entering the trachea causes a muscular spasm in the larynx that seals the airway and prevents the passage of water into the lungs. This spasm is likely to last until unconsciousness occurs. |
| “You can tell when someone is drowning because they will shout for help and wave their arms to attract attention.” | The muscular spasm that seals the airway prevents the passage of air, as well as water, so a person who is drowning is unable to shout or call for help. In addition, instinctive reactions that occur in the final minute or so before a drowning person sinks under the water may look similar to calm, safe behavior. The head is likely to be low in the water, tilted back, with the mouth open. The person may have uncontrolled movements of the arms and legs, but they are unlikely to be visible above the water. |
| “It is too late to save a person who is unconscious in the water.” | An unconscious person rescued with an airway still sealed from the muscular spasm of the larynx stands a good chance of full recovery if they start receiving CPR within minutes. Without water in the lungs, CPR is much more effective. Even if cardiac arrest has occurred so the heart is no longer beating, there is still a chance of recovery. The longer the brain goes without oxygen, however, the more likely brain cells are to die. Brain death is likely after about six minutes without oxygen, except in exceptional circumstances, such as young people drowning in very cold water. There are examples of children surviving, apparently without lasting ill effects, for as long as an hour in cold water. Rescuers retrieving a child from cold water should attempt resuscitation even after a protracted period of immersion. |
| “If someone is drowning, you should start administering CPR immediately, even before you try to get the person out of the water.” | Removing a drowning person from the water is the first priority, because CPR is ineffective in the water. The goal should be to bring the person to stable ground as quickly as possible and then to start CPR. |
| “You are unlikely to drown unless you are in water over your head.” | Depending on circumstances, people have drowned in as little as 30 mm (about 1 ½ in.) of water. Inebriated people or those under the influence of drugs, for example, have been known to have drowned in puddles. Hundreds of children have drowned in the water in toilets, bathtubs, basins, showers, pails, and buckets (see Figure 13.3.5). |
13.3 Summary
- Breathing, or , is the two-step process of drawing air into the lungs (inhaling) and letting air out of the lungs (exhaling). is an active process that results mainly from contraction of a muscle called the diaphragm. is typically a passive process that occurs mainly due to the elasticity of the lungs when the diaphragm relaxes.
- Breathing is one of the few vital bodily functions that can be controlled consciously, as well as unconsciously. Conscious control of breathing is common in many activities, including swimming and singing. There are limits on the conscious control of breathing, however. If you try to hold your breath, for example, you will soon have an irrepressible urge to breathe.
- Unconscious breathing is controlled by respiratory centers in the and of the brainstem. They respond to variations in blood by either increasing or decreasing the rate of breathing as needed to return the pH level to the normal range.
- Nasal breathing is generally considered to be superior to mouth breathing because it does a better job of filtering, warming, and moistening incoming air. It also results in slower emptying of the lungs, which allows more oxygen to be extracted from the air.
- Drowning is a major cause of death in Canada, in particular in children under the age of five. It is important to supervise small children when they are playing in, around, or with water.
13.3 Review Questions
- Define breathing.
- Give examples of activities in which breathing is consciously controlled.
- Explain how unconscious breathing is controlled.
- Young children sometimes threaten to hold their breath until they get something they want. Why is this an idle threat?
- Why is nasal breathing generally considered superior to mouth breathing?
- Give one example of a situation that would cause blood pH to rise excessively. Explain why this occurs.
13.3 Explore More
How breathing works – Nirvair Kaur, TED-Ed, 2012.
How do ventilators work? – Alex Gendler, TED-Ed, 2020.
How I held my breath for 17 minutes | David Blaine, TED, 2010.
The Ultimate Relaxation Technique: How To Practice Diaphragmatic Breathing For Beginners, Kai Simon, 2015.
Attributions
Figure 13.3.1
US_Marines_butterfly_stroke by Cpl. Jasper Schwartz from U.S. Marine Corps on Wikimedia Commons is in the public domain (https://en.wikipedia.org/wiki/Public_domain).
Figure 13.3.2
Inhale Exhale/Breathing cycle by Siyavula Education on Flickr is used under a CC BY 2.0 (https://creativecommons.org/licenses/by/2.0/) license.
Figure 13.3.3
Trumpet/ Frenchmen Street [photo] by Morgan Petroski on Unsplash is used under the Unsplash License (https://unsplash.com/license).
Figure 13.3.4
Respiratory_Centers_of_the_Brain by OpenStax College on Wikimedia Commons is used under a CC BY 3.0 (https://creativecommons.org/licenses/by/3.0) license.
Figure 13.3.5
Lily & Ava in the Kiddie Pool by mob mob on Flickr is used under a CC BY-NC 2.0 (https://creativecommons.org/licenses/by-nc/2.0/) license.
References
Betts, J. G., Young, K.A., Wise, J.A., Johnson, E., Poe, B., Kruse, D.H., Korol, O., Johnson, J.E., Womble, M., DeSaix, P. (2013, June 19). Figure 22.20 Respiratory centers of the brain [digital image]. In Anatomy and Physiology (Section 22.3). OpenStax. https://openstax.org/books/anatomy-and-physiology/pages/22-3-the-process-of-breathing
Kai Simon. (2015, January 11). The ultimate relaxation technique: How to practice diaphragmatic breathing for beginners. YouTube. https://www.youtube.com/watch?v=Vca6DyFqt4c&feature=youtu.be
TED. (2010, January 19). How I held my breath for 17 minutes | David Blaine. YouTube. https://www.youtube.com/watch?v=XFnGhrC_3Gs&feature=youtu.be
TED-Ed. (2012, October 4). How breathing works – Nirvair Kaur. YouTube. https://www.youtube.com/watch?v=Kl4cU9sG_08&feature=youtu.be
TED-Ed. (2020, May 21). How do ventilators work? – Alex Gendler. YouTube. https://www.youtube.com/watch?v=yDtKBXOEsoM&feature=youtu.be
Created by CK-12/Adapted by Christine Miller
Case Study: Our Invisible Inhabitants
Lanying is suffering from a fever, body aches, and a painful sore throat that feels worse when she swallows. She visits her doctor, who examines her and performs a throat culture. When the results come back, he tells her that she has strep throat, which is caused by the bacteria Streptococcus pyogenes. He prescribes an antibiotic that will either kill the bacteria or stop it from reproducing, and advises her to take the full course of the treatment even if she is feeling better earlier. Stopping early can cause an increase in bacteria that are resistant to antibiotics.
Lanying takes the antibiotic as prescribed. Toward the end of the course, her throat is feeling much better — but she can’t say the same for other parts of her body! She has developed diarrhea and an itchy vaginal yeast infection. She calls her doctor, who suspects that the antibiotic treatment has caused both the digestive distress and the yeast infection. He explains that our bodies are home to many different kinds of microorganisms, some of which are actually beneficial to us because they help us digest our food and minimize the population of harmful microorganisms. When we take an antibiotic, many of these “good” bacteria are killed along with the “bad,” disease-causing bacteria, which can result in diarrhea and yeast infections.
Lanying's doctor prescribes an antifungal medication for her yeast infection. He also recommends that she eat yogurt with live cultures, which will help replace the beneficial bacteria in her gut. Our bodies contain a delicate balance of inhabitants that are invisible without a microscope, and changes in that balance can cause unpleasant health effects.
What Is Human Biology?
As you read the rest of this book, you'll learn more amazing facts about the human organism, and you'll get a better sense of how biology relates to your health. Human biology is the scientific study of the human species, which includes the fascinating story of human evolution and a detailed account of our genetics, anatomy, physiology, and ecology. In short, the study focuses on how we got here, how we function, and the role we play in the natural world. This helps us to better understand human health, because we can learn how to stay healthy and how diseases and injuries can be treated. Human biology should be of personal interest to you to the extent that it can benefit your own health, as well as the health of your friends and family. This branch of science also has broader implications for society and the human species as a whole.
Chapter Overview: Living Organisms and Human Biology
In the rest of this chapter, you'll learn about the traits shared by all living things, the basic principles that underlie all of biology, the vast diversity of living organisms, what it means to be human, and our place in the animal kingdom. Specifically, you'll learn:
- The seven traits shared by all living things: or the maintenance of a more-or-less constant internal environment; multiple levels of organization consisting of one or more ; the use of energy and ; the ability to grow and develop; the ability to evolve adaptations to the environment; the ability to detect and respond to environmental stimuli; and the ability to .
- The basic principles that unify all fields of biology, including gene theory, homeostasis, and evolutionary theory.
- The diversity of life (including the different kinds of biodiversity), the definition of a species, the classification and naming systems for living organisms, and how evolutionary relationships can be represented through diagrams, such as phylogenetic trees.
- How the human species is classified and how we've evolved from our close relatives and ancestors.
- The physical traits and social behaviors that humans share with other primates.
As you read this chapter, consider the following questions about Lanying's situation:
- What do single-celled organisms (such as the bacteria and yeast living in and on Lanying) have in common with humans?
- How are bacteria, yeast, and humans classified?
- How do the concepts of and apply to Lanying’s situation?
- Why can stopping antibiotics early cause the development of antibiotic-resistant bacteria?
Attribution
Figure 2.1.1
Photo (face mask) by Michael Amadeus, on Unsplash is used under the Unsplash license (https://unsplash.com/license).
Reference
Mayo Clinic Staff (n.d.). Strep throat [online article]. MayoClinic.org. https://www.mayoclinic.org/diseases-conditions/strep-throat/symptoms-causes/syc-20350338
Created by: CK-12/Adapted by Christine Miller
Mutant Cosplay
You probably recognize these costumed comic fans in Figure 5.8.1 as two of the four Teenage Mutant Ninja Turtles. Can a mutation really turn a reptile into an anthropomorphic superhero? Of course not — but mutations can often result in other drastic (but more realistic) changes in living things.
What Are Mutations?
are random changes in the sequence of bases in or . The word mutation may make you think of the Ninja Turtles, but that's a misrepresentation of how most mutations work. First of all, everyone has mutations. In fact, most people have dozens (or even hundreds!) of mutations in their DNA. Secondly, from an evolutionary perspective, mutations are essential. They are needed for evolution to occur because they are the ultimate source of all new genetic variation in any .
Causes of Mutations
Mutations have many possible causes. Some mutations seem to happen spontaneously, without any outside influence. They occur when errors are made during DNA replication or during the transcription phase of protein synthesis. Other mutations are caused by environmental factors. Anything in the environment that can cause a mutation is known as a mutagenno post. Examples of mutagens are shown in the figure below.
Types of Mutations
Mutations come in a variety of types. Two major categories of mutations are germline mutations and somatic mutations.
- occur in gametes (the sex cells), such as eggs and sperm. These mutations are especially significant because they can be transmitted to offspring, causing every cell in the offspring to carry those mutations.
- occur in other cells of the body. These mutations may have little effect on the organism, because they are confined to just one cell and its daughter cells. Somatic mutations cannot be passed on to offspring.
Mutations also differ in the way that the genetic material is changed. Mutations may change an entire chromosome, or they may alter just one or a few nucleotides.
Chromosomal Alterations
are mutations that change chromosome structure. They occur when a section of a chromosome breaks off and rejoins incorrectly, or otherwise does not rejoin at all. Possible ways in which these mutations can occur are illustrated in the figure below. Chromosomal alterations are very serious. They often result in the death of the organism in which they occur. If the organism survives, it may be affected in multiple ways. An example of a human disease caused by a chromosomal duplication is Charcot-Marie-Tooth disease type 1 (CMT1). It is characterized by muscle weakness, as well as loss of muscle tissue and sensation. The most common cause of CMT1 is a duplication of part of chromosome 17.
Point Mutations
A is a change in a single nucleotide in DNA. This type of mutation is usually less serious than a chromosomal alteration. An example of a point mutation is a mutation that changes the codon UUU to the codon UCU. Point mutations can be silent, missense, or nonsense mutations, as described in Table 5.8.1. The effects of point mutations depend on how they change the genetic code.
| Type | Description | Example | Effect |
|---|---|---|---|
| Silent | mutated codon codes for the same | CAA (glutamine) → CAG (glutamine) | none |
| Missense | mutated codon codes for a different amino acid | CAA (glutamine) → CCA (proline) | variable |
| Nonsense | mutated codon is a premature stop codon | CAA (glutamine) → UAA (stop) usually | serious |
Frameshift Mutations
A is a deletion or insertion of one or more nucleotides, changing the of the base sequence. Deletions remove nucleotides, and insertions add nucleotides. Consider the following sequence of bases in RNA:
AUG-AAU-ACG-GCU = start-asparagine-threonine-alanine
Now, assume that an insertion occurs in this sequence. Let’s say an A nucleotide is inserted after the start codon AUG. The sequence of bases becomes:
AUG-AAA-UAC-GGC-U = start-lysine-tyrosine-glycine
Even though the rest of the sequence is unchanged, this insertion changes the reading frame and, therefore, all of the codons that follow it. As this example shows, a frameshift mutation can dramatically change how the codons in mRNA are read. This can have a drastic effect on the product.
Effects of Mutations
The majority of have neither negative nor positive effects on the organism in which they occur. These mutations are called neutral mutations. Examples include silent point mutations, which are neutral because they do not change the amino acids in the proteins they encode.
Many other mutations have no effects on the organism because they are repaired before protein synthesis occurs. Cells have multiple repair mechanisms to fix mutations in DNA.
Beneficial Mutations
Some mutations — known as beneficial mutations — have a positive effect on the organism in which they occur. They generally code for new versions of proteins that help organisms adapt to their environment. If they increase an organism’s chances of surviving or reproducing, the mutations are likely to become more common over time. There are several well-known examples of beneficial mutations. Here are two such examples:
- Mutations have occurred in bacteria that allow the bacteria to survive in the presence of antibiotic drugs, leading to the evolution of antibiotic-resistant strains of bacteria.
- A unique mutation is found in people in Limone, a small town in Italy. The mutation protects them from developing atherosclerosis, which is the dangerous buildup of fatty materials in blood vessels despite a high-fat diet. The individual in which this mutation first appeared has even been identified and many of his descendants carry this gene.
Harmful Mutations
Imagine making a random change in a complicated machine, such as a car engine. There is a chance that the random change would result in a car that does not run well — or perhaps does not run at all. By the same token, a random change in a gene's DNA may result in the production of a protein that does not function normally... or may not function at all. Such mutations are likely to be harmful. Harmful mutations may cause genetic disorders or .
- A genetic disorder is a disease, syndrome, or other abnormal condition caused by a mutation in one or more genes, or by a chromosomal alteration. An example of a genetic disorder is cystic fibrosis. A mutation in a single gene causes the body to produce thick, sticky mucus that clogs the lungs and blocks ducts in digestive organs.
- is a disease in which cells grow out of control and form abnormal masses of cells (called tumors). It is generally caused by mutations in genes that regulate the . Because of the mutations, cells with damaged are allowed to divide without restriction.
Feature: My Human Body
Inherited mutations are thought to play a role in roughly five to ten per cent of all cancers. Specific mutations that cause many of the known hereditary cancers have been identified. Most of the mutations occur in genes that control the growth of cells or the repair of damaged DNA.
Genetic testing can be done to determine whether individuals have inherited specific cancer-causing mutations. Some of the most common inherited cancers for which genetic testing is available include hereditary breast and ovarian cancer, caused by mutations in genes called BRCA1 and BRCA2. Besides breast and ovarian cancers, mutations in these genes may also cause pancreatic and prostate cancers. Genetic testing is generally done on a small sample of body fluid or tissue, such as blood, saliva, or skin cells. The sample is analyzed by a lab that specializes in genetic testing, and it usually takes at least a few weeks to get the test results.
Should you get genetic testing to find out whether you have inherited a cancer-causing mutation? Such testing is not done routinely just to screen patients for risk of cancer. Instead, the tests are generally done only when the following three criteria are met:
- The test can determine definitively whether a specific gene mutation is present. This is the case with the BRCA1 and BRCA2 gene mutations, for example.
- The test results would be useful to help guide future medical care. For example, if you found out you had a mutation in the BRCA1 or BRCA2 gene, you might get more frequent breast and ovarian cancer screenings than are generally recommended.
- You have a personal or family history that suggests you are at risk of an inherited cancer.
Criterion number 3 is based, in turn, on such factors as:
- Diagnosis of cancer at an unusually young age.
- Several different cancers occurring independently in the same individual.
- Several close genetic relatives having the same type of cancer (such as a maternal grandmother, mother, and sister all having breast cancer).
- Cancer occurring in both organs in a set of paired organs (such as both kidneys or both breasts).
If you meet the criteria for genetic testing and are advised to undergo it, genetic counseling is highly recommended. A genetic counselor can help you understand what the results mean and how to make use of them to reduce your risk of developing cancer. For example, a positive test result that shows the presence of a mutation may not necessarily mean that you will develop cancer. It may depend on whether the gene is located on an autosome or sex chromosome, and whether the mutation is dominant or recessive. Lifestyle factors may also play a role in cancer risk even for hereditary cancers. Early detection can often be life saving if cancer does develop. Genetic counseling can also help you assess the chances that any children you may have will inherit the mutation.
5.8 Summary
- are random changes in the sequence of bases in or . Most people have multiple mutations in their DNA without ill effects. Mutations are the ultimate source of all new genetic variation in any species.
- Mutations may happen spontaneously during or . Other mutations are caused by environmental factors called mutagensno post. Mutagens include radiation, certain chemicals, and some infectious agents.
- occur in gametes and may be passed onto offspring. Every cell in the offspring will then have the mutation. occur in cells other than gametes and are confined to just one cell and its daughter cells. These mutations cannot be passed on to offspring.
- are mutations that change chromosome structure and usually affect the organism in multiple ways. Charcot-Marie-Tooth disease type 1 is an example of a chromosomal alteration in humans.
- are changes in a single nucleotide. The effects of point mutations depend on how they change the genetic code and may range from no effects to very serious effects.
- change the reading frame of the genetic code and are likely to have a drastic effect on the encoded protein.
- Many mutations are neutral and have no effect on the organism in which they occur. Some mutations are beneficial and improve fitness. An example is a mutation that confers antibiotic resistance in bacteria. Other mutations are harmful and decrease fitness, such as the mutations that cause genetic disorders or .
5.8 Review Question
- Define mutation.
- Identify causes of mutation.
- Compare and contrast germline and somatic mutations.
- Describe chromosomal alterations, point mutations, and frameshift mutations. Identify the potential effects of each type of mutation.
- Why do many mutations have neutral effects?
- Give one example of a beneficial mutation and one example of a harmful mutation.
- Why do you think that exposure to mutagens (such as cigarette smoke) can cause cancer?
- Explain why the insertion or deletion of a single nucleotide can cause a frameshift mutation.
- Compare and contrast missense and nonsense mutations.
- Explain why mutations are important to evolution.
5.8 Explore More
https://www.youtube.com/watch?time_continue=51&v=PQjL4ZDuq2o&feature=emb_logo
How Radiation Changes Your DNA, Seeker, 2016.
https://www.youtube.com/watch?v=z9HIYjRRaDE&t=93s
Where do genes come from? - Carl Zimmer, TED-Ed, 2014.
https://www.youtube.com/watch?v=a63t8r70QN0&feature=youtu.be
What you should know about vaping and e-cigarettes | Suchitra Krishnan-Sarin,
TED, 2019.
Attributions
Figure 5.8.1
Ninja Turtles by Pat Loika on Flickr is used under a CC BY 2.0 (https://creativecommons.org/licenses/by/2.0/) license.
Figure 5.8.2
Separate images are all in public domain or CC licensed:
- Beauty treatment face mask by no-longer-here on Pixabay is used under the Pixabay License (https://pixabay.com/service/license/).
- HPV by AJC1 on Flickr is used under a CC BY-NC 2.0 (https://creativecommons.org/licenses/by-nc/2.0/) license.
- H Pylori by AJC1 on Flickr is used under a CC BY-NC 2.0 (https://creativecommons.org/licenses/by-nc/2.0/) license.
- Vape and Cigarette by Vaping360 on Flickr is used under a CC BY 2.0 (https://creativecommons.org/licenses/by/2.0/) license.
- Hand X-Ray by Hellerhoff on Wikimedia Commons - CC BY-SA 3.0 (https://creativecommons.org/licenses/by-sa/3.0/deed.en) license.
- Hot dogs by unknown on PxFuel is used under the Pxfuel Terms (https://www.pxfuel.com/terms-of-use).
- Sunshine face is clipart.
Figure 5.8.3
Scheme of possible chromosome mutations/ Chromosomenmutationen by unknown on Wikimedia Commons is adapted from NIH's Talking Glossary of Genetics. [Changes as described by de:user:Dietzel65]. Further use and adapation (text translated to English) by Christine Miller as image is in the public domain (https://en.wikipedia.org/wiki/Public_domain).
References
Seeker. (2016, April 23). How radiation changes your DNA. YouTube. https://www.youtube.com/watch?v=PQjL4ZDuq2o&feature=youtu.be
TED. (2019, June 5). What you should know about vaping and e-cigarettes | Suchitra Krishnan-Sarin. YouTube. https://www.youtube.com/watch?v=a63t8r70QN0&feature=youtu.be
TED-Ed. (2014, September 22). Where do genes come from? - Carl Zimmer. YouTube. https://www.youtube.com/watch?v=z9HIYjRRaDE&feature=youtu.be
Wikipedia contributors. (2020, July 6). Breast cancer. In Wikipedia. https://en.wikipedia.org/w/index.php?title=Breast_cancer&oldid=966366739
Wikipedia contributors. (2020, July 9). Charcot–Marie–Tooth disease. In Wikipedia. https://en.wikipedia.org/w/index.php?title=Charcot%E2%80%93Marie%E2%80%93Tooth_disease&oldid=966912915
Wikipedia contributors. (2020, July 7). Cystic fibrosis. In Wikipedia. https://en.wikipedia.org/w/index.php?title=Cystic_fibrosis&oldid=966566921
Wikipedia contributors. (2020, June 4). Limone sul Garda. In Wikipedia. https://en.wikipedia.org/w/index.php?title=Limone_sul_Garda&oldid=960771991
Wikipedia contributors. (2020, June 23). Ovarian cancer. In Wikipedia. https://en.wikipedia.org/w/index.php?title=Ovarian_cancer&oldid=964157192
Wikipedia contributors. (2020, May 7). BRCA mutation. In Wikipedia. https://en.wikipedia.org/w/index.php?title=BRCA_mutation&oldid=955463902
Wikipedia contributors. (2020, July 10). Teenage Mutant Ninja Turtles. In Wikipedia. https://en.wikipedia.org/w/index.php?title=Teenage_Mutant_Ninja_Turtles&oldid=967030468
A large cavity found in the torso of mammals between the thoracic cavity, which it is separated from by the thoracic diaphragm, and the pelvic cavity. Organs of the abdominal cavity include the stomach, liver, gallbladder, spleen, pancreas, small intestine, kidneys, large intestine, and adrenal glands.
Created by CK-12/Adapted by Christine Miller
Case Study: Diet Dilemma
Joseph is a college student who has watched his father suffer from complications of type 2 diabetes for the past few years. For people with type 2 diabetes, the hormone insulin does not transmit its signal sufficiently. Insulin normally removes sugar from the bloodstream and brings it into the body’s cells. Diabetes prevents blood sugar levels from being properly regulated, and this can cause damage to the cells.
Diabetes can be treated with insulin injections, as shown above, as well as with dietary modifications, but complications can still occur. Joseph’s father has some nerve damage (or neuropathy) in his feet which makes his feet numb. He didn’t notice when he developed minor injuries to his feet which caused some serious infections.
Joseph is obese and knows that his weight — along with a family history of diabetes — increases his risk of getting the disease himself. He wants to avoid the health issues that his father suffered, so he begins walking every day for exercise and starts to lose weight. Joseph also wants to improve his diet in order to lose more weight, lower his risk of diabetes, and improve his general health, but he is overwhelmed with all of the different dietary advice he reads online and hears from his friends and family.
Joseph’s father tells him to limit refined carbohydrates, such as white bread and rice, because that is what he does to help keep his blood sugar at an acceptable level, but Joseph’s friend tells him that eating a diet high in carbohydrates and low in fat is a good way to lose weight. Joseph reads online that “eating clean” by eating whole, unprocessed foods and avoiding food with “chemicals” can help with weight loss. One piece of advice that everyone seems to agree on is that drinking enough water is good for overall health.
All this dietary advice may sound confusing, but you can better understand health conditions, such as diabetes, and the role of diet and nutrition by understanding chemistry. Chemistry is much more than chemical reactions in test tubes in a lab — it is the atoms, molecules, and reactions that make us who we are and keep us alive and functioning properly. Our diets are one of the main ways our bodies take in raw materials that are needed for the important chemical reactions that take place inside of us.
Chapter Overview: Chemistry
As you read this chapter, you will learn more about how chemistry relates to our lives, health, and the foods we eat. Specifically, you will learn about:
- The nature of chemical substances, including elements, compounds, and their component and molecules.
- The structures and functions of biochemical compounds, including carbohydrates, lipids, proteins, and nucleic acids (such as and RNA).
- What chemical reactions are, how energy is involved in chemical reactions, how enzymes assist in chemical reactions, and some types of biochemical reactions in living organisms.
- Properties of water and the importance of water for most biochemical processes.
- What pH is, and why maintaining a proper pH in the body is important for biochemical reactions.
As you read the chapter, think about the following questions regarding Joseph’s situation, as well as how diabetes and diet relate to the chemistry of life:
- Why do you think Joseph’s father's diabetes increases Joseph's risk of getting diabetes?
- What is the difference between refined (simple) carbohydrates and complex carbohydrates? Why are refined carbohydrates particularly problematic for people with diabetes?
- Insulin is a peptide hormone. In which class of biochemical compounds would you categorize insulin?
- Why is drinking enough water important for overall health? Can you drink too much water?
- Sometimes “eating clean” is described as avoiding “chemicals” in food. Think about the definition of “chemicals” and how it relates to what we eat.
Attributions
Figure 3.1.1
Diabetes-equipment by Steve Buissinne [stevepb] on Pixabay is used under the Pixabay License (https://pixabay.com/de/service/license/).
Figure 3.1.2
Early Morning Hike, by Luke Pamer on Unsplash, is used under the Unsplash license (https://unsplash.com/license).
References
Mayo Clinic Staff. (n.d.). Peripheral neuropathy [online article]. MayoClinic.org. https://www.mayoclinic.org/diseases-conditions/peripheral-neuropathy/symptoms-causes/syc-20352061
Mayo Clinic Staff. (n.d.). Type 2 diabetes [online article]. MayoClinic.org. https://www.mayoclinic.org/diseases-conditions/type-2-diabetes/symptoms-causes/syc-20351193
Image shows an african-american man sitting on a ledge looking out at the sun setting over the ocean.
Diagram of a lithium atom. Three protons and four neutrons are in the nucleus, and three electrons are orbiting the nucleus.
Created by CK-12 Foundation/Adapted by Christine Miller
Crohn’s Rash
If you had a skin rash like the one shown in Figure 15.7.1, you probably wouldn’t assume that it was caused by a digestive system disease. However, that’s exactly why the individual in the picture has a rash. He has a gastrointestinal (GI) tract disorder called . This disease is one of a group of GI tract disorders that are known collectively as inflammatory bowel disease. Unlike other inflammatory bowel diseases, signs and symptoms of Crohn’s disease may not be confined to the GI tract.
Inflammatory Bowel Disease
(IBD) is a collection of inflammatory conditions primarily affecting the intestines. The two principal inflammatory bowel diseases are and . Unlike Crohn’s disease — which may affect any part of the GI tract and the joints, as well as the skin — ulcerative colitis mainly affects just the colon and rectum. Both diseases occur when the body’s own immune systemno post attacks the digestive system. Both diseases typically first appear in the late teens or early twenties, and occur equally in males and females. Approximately 270,000 Canadians are currently living with IBD, 7,000 of which are children. The annual cost of caring for these Canadians is estimated at $1.28 billion. The number of cases of IBD has been steadily increasing and it is expected that by 2030 the number of Canadians suffering from IBD will grow to 400,000.
Crohn’s Disease
is a type of inflammatory bowel disease that may affect any part of the GI tract from the mouth to the anus, among other body tissues. The most commonly affected region is the , which is the final part of the small intestine. Signs and symptoms of Crohn’s disease typically include abdominal pain, (with or without blood), fever, and weight loss. Malnutrition because of faulty absorption of nutrients may also occur. Potential complications of Crohn’s disease include obstructions and abscesses of the bowel. People with Crohn’s disease are also at slightly greater risk than the general population of developing bowel . Although there is a slight reduction in life expectancy in people with Crohn’s disease, if the disease is well-managed, affected people can live full and productive lives. Approximately 135,000 Canadians are living with Crohn's disease.
Crohn’s disease is caused by a combination of genetic and environmental factors that lead to impairment of the generalized immune response (called innate immunity). The chronic inflammation of Crohn’s disease is thought to be the result of the immune system “trying” to compensate for the impairment. Dozens of genes are likely to be involved, only a few of which have been identified. Because of the genetic component, close relatives such as siblings of people with Crohn’s disease are many times more likely to develop the disease than people in the general population. Environmental factors that appear to increase the risk of the disease include smoking tobacco and eating a diet high in animal proteins. Crohn’s disease is typically diagnosed on the basis of a colonoscopy, which provides a direct visual examination of the inside of the colon and the ileum of the small intestine.
People with Crohn’s disease typically experience recurring periods of flare-ups followed by remission. There are no medications or surgical procedures that can cure Crohn’s disease, although medications such as anti-inflammatory or immune-suppressing drugs may alleviate symptoms during flare-ups and help maintain remission. Lifestyle changes, such as dietary modifications and smoking cessation, may also help control symptoms and reduce the likelihood of flare-ups. Surgery may be needed to resolve bowel obstructions, abscesses, or other complications of the disease.
Ulcerative Colitis
is an inflammatory bowel disease that causes inflammation and ulcers (sores) in the colon and rectum. Unlike Crohn’s disease, other parts of the GI tract are rarely affected in ulcerative colitis. The primary symptoms of the disease are lower abdominal pain and bloody . Weight loss, fever, and may also be present. Symptoms typically occur intermittently with periods of no symptoms between flare-ups. People with ulcerative colitis have a considerably increased risk of colon and should be screened for colon cancer more frequently than the general population. Ulcerative colitis, however, seems to primarily reduce the quality of life, and not the lifespan.
The exact cause of ulcerative colitis is not known. Theories about its cause involve immune system dysfunction, genetics, changes in normal gut bacteria, and lifestyle factors, such as a diet high in animal protein and the consumption of alcoholic beverages. Genetic involvement is suspected in part because ulcerative colitis tens to “run” in families. It is likely that multiple genes are involved. Diagnosis is typically made on the basis of colonoscopy and tissue biopsies.
Lifestyle changes, such as reducing the consumption of animal protein and alcohol, may improve symptoms of ulcerative colitis. A number of medications are also available to treat symptoms and help prolong remission. These include anti-inflammatory drugs and drugs that suppress the immune system. In cases of severe disease, removal of the colon and rectum may be required and can cure the disease.
Diverticulitis
is a digestive disease in which tiny pouches in the wall of the large intestine become infected and inflamed. Symptoms typically include lower abdominal pain of sudden onset. There may also be fever, nausea, diarrhea or constipation, and blood in the stool. Having large intestine pouches called diverticula (see Figure 15.7.2) that are not inflamed is called . Diverticulosis is thought to be caused by a combination of genetic and environmental factors, and is more common in people who are obese. Infection and inflammation of the pouches (diverticulitis) occurs in about 10–25% of people with diverticulosis, and is more common at older ages. The infection is generally caused by bacteria.
Diverticulitis can usually be diagnosed with a CT scan and can be monitored with a colonoscopy (as seen in Figure 15.7.3). Mild diverticulitis may be treated with oral antibiotics and a short-term liquid diet. For severe cases, intravenous antibiotics, hospitalization, and complete bowel rest (no nourishment via the mouth) may be recommended. Complications such as abscess formation or perforation of the colon require surgery.
Peptic Ulcer
A is a sore in the lining of the stomach or the duodenum (first part of the small intestine). If the ulcer occurs in the stomach, it is called a gastric ulcer. If it occurs in the duodenum, it is called a duodenal ulcer. The most common symptoms of peptic ulcers are upper abdominal pain that often occurs in the night and improves with eating. Other symptoms may include belching, vomiting, weight loss, and poor appetite. Many people with peptic ulcers, particularly older people, have no symptoms. Peptic ulcers are relatively common, with about ten per cent of people developing a peptic ulcer at some point in their life.
The most common cause of peptic ulcers is infection with the bacterium Helicobacter pylori, which may be transmitted by food, contaminated water, or human saliva (for example, by kissing or sharing eating utensils). Surprisingly, the bacterial cause of peptic ulcers was not discovered until the 1980s. The scientists who made the discovery are Australians Robin Warren and Barry J. Marshall. Although the two scientists eventually won a Nobel Prize for their discovery, their hypothesis was poorly received at first. To demonstrate the validity of their discovery, Marshall used himself in an experiment. He drank a culture of bacteria from a peptic ulcer patient and developed symptoms of peptic ulcer in a matter of days. His symptoms resolved on their own within a couple of weeks, but, at his wife's urging, he took antibiotics to kill any remaining bacteria. Marshall’s self-experiment was published in the Australian Medical Journal, and is among the most cited articles ever published in the journal. Figure 15.7.4 shows how H. pylori cause peptic ulcers.
Another relatively common cause of peptic ulcers is chronic use of non-steroidal anti-inflammatory drugs (NSAIDs), such as aspirin or ibuprofen. Additional contributing factors may include tobacco smoking and stress, although these factors have not been demonstrated conclusively to cause peptic ulcers independent of H. pylori infection. Contrary to popular belief, diet does not appear to play a role in either causing or preventing peptic ulcers. Eating spicy foods and drinking coffee and alcohol were once thought to cause peptic ulcers. These lifestyle choices are no longer thought to have much (if any) of an effect on the development of peptic ulcers.
Peptic ulcers are typically diagnosed on the basis of symptoms or the presence of H. pylori in the GI tract. However, endoscopy (shown in Figure 15.7.5), which allows direct visualization of the stomach and duodenum with a camera, may be required for a definitive diagnosis. Peptic ulcers are usually treated with antibiotics to kill H. pylori, along with medications to temporarily decrease stomach acid and aid in healing. Unfortunately, H. pylori has developed resistance to commonly used antibiotics, so treatment is not always effective. If a peptic ulcer has penetrated so deep into the tissues that it causes a perforation of the wall of the stomach or duodenum, then emergency surgery is needed to repair the damage.
Gastroenteritis
, also known as infectious diarrhea or stomach flu, is an acute and usually self-limiting infection of the GI tract by . Symptoms typically include some combination of , , and abdominal pain. Fever, lack of energy, and dehydration may also occur. The illness generally lasts less than two weeks, even without treatment, but in young children it is potentially deadly. Gastroenteritis is very common, especially in poorer nations. Worldwide, up to five billion cases occur each year, resulting in about 1.4 million deaths.
Commonly called “stomach flu,” gastroenteritis is unrelated to the influenza virus, although viruses are the most common cause of the disease (see Figure 15.7.6). In children, is most often the cause which is why the British Columbia immunization schedule now includes a rotovirus vaccine. is more likely to be the cause of gastroenteritis in adults. Besides viruses, other potential causes of gastroenteritis include fungi, bacteria (most often E. coli or Campylobacter jejuni), and protozoa(including Giardia lamblia, more commonly called Beaver Fever, described below). Transmission of pathogens may occur due to eating improperly prepared foods or foods left to stand at room temperature, drinking contaminated water, or having close contact with an infected individual.
Gastroenteritis is less common in adults than children, partly because adults have acquired immunity after repeated exposure to the most common infectious agents. Adults also tend to have better hygiene than children. If children have frequent repeated incidents of gastroenteritis, they may suffer from malnutrition, stunted growth, and developmental delays. Many cases of gastroenteritis in children can be avoided by giving them a rotavirus vaccine. Frequent and thorough handwashing can cut down on infections caused by other pathogens.
Treatment of gastroenteritis generally involves increasing fluid intake to replace fluids lost in vomiting or diarrhea. Oral rehydration solution, which is a combination of water, salts, and sugar, is often recommended. In severe cases, intravenous fluids may be needed. Antibiotics are not usually prescribed, because they are ineffective against viruses that cause most cases of gastroenteritis.
Giardiasis
, popularly known as beaver fever, is a type of gastroenteritis caused by a GI tract parasite, the single-celled protozoan Giardia lamblia (pictured in Figure 15.7.7). In addition to human beings, the parasite inhabits the digestive tract of a wide variety of domestic and wild animals, including cows, rodents, and sheep, as well as beavers (hence its popular name). Giardiasis is one of the most common parasitic infections in people the world over, with hundreds of millions of people infected worldwide each year.
Transmission of G. lamblia is via a fecal-oral route (as in, you got feces in your food). Those at greatest risk include travelers to countries where giardiasis is common, people who work in child-care settings, backpackers and campers who drink untreated water from lakes or rivers, and people who have close contact with infected people or animals in other settings. In Canada, Giardia is the most commonly identified intestinal parasite and approximately 3,000 Canadians will contract the parasite annually.
Symptoms of giardiasis can vary widely. About one-third third of people with the infection have no symptoms, whereas others have severe diarrhea with poor absorption of nutrients. Problems with absorption occur because the parasites inhibit intestinal digestive enzyme production, cause detrimental changes in microvilli lining the small intestine, and kill off small intestinal epithelial cells. The illness can result in weakness, loss of appetite, stomach cramps, vomiting, and excessive gas. Without treatment, symptoms may continue for several weeks. Treatment with anti-parasitic medications may be needed if symptoms persist longer or are particularly severe.
15.7 Summary
- is a collection of inflammatory conditions primarily affecting the intestines. The diseases involve the immune system attacking the GI tract, and they have multiple genetic and environmental causes. Typical symptoms include abdominal pain and diarrhea, which show a pattern of repeated flare-ups interrupted by periods of remission. Lifestyle changes and medications may control flare-ups and extend remission. Surgery is sometimes required.
- The two principal inflammatory bowel diseases are and . Crohn’s disease may affect any part of the GI tract from the mouth to the anus, among other body tissues. Ulcerative colitis affects the colon and/or rectum.
- Some people have little pouches, called diverticula, in the lining of their large intestine, a condition called . People with diverticulosis may develop diverticulitis, in which one or more of the diverticula become infected and inflamed. is generally treated with antibiotics and bowel rest. Sometimes, surgery is required.
- A peptic ulcer is a sore in the lining of the stomach (gastric ulcer) or duodenum (duodenal ulcer). The most common cause is infection with the bacterium Helicobacter pylori. (such as aspirin) can also cause peptic ulcers, and some lifestyle factors may play contributing roles. Antibiotics and acid reducers are typically prescribed, and surgery is not often needed.
- , or infectious diarrhea, is an acute and usually self-limiting infection of the GI tract by pathogens, most often viruses. Symptoms typically include diarrhea, vomiting, and/or abdominal pain. Treatment includes replacing lost fluids. Antibiotics are not usually effective.
- Giardiasis is a type of gastroenteritis caused by infection of the GI tract with the protozoa parasite Giardia lamblia. It may cause malnutrition. Generally self-limiting, severe or long-lasting cases may require antibiotics.
15.7 Review Questions
- Compare and contrast Crohn’s disease and ulcerative colitis.
- How are diverticulosis and diverticulitis related?
- Identify the cause of giardiasis. Why may it cause malabsorption?
- Name three disorders of the GI tract that can be caused by bacteria.
- Name one disorder of the GI tract that can be helped by anti-inflammatory medications, and one that can be caused by chronic use of anti-inflammatory medications.
- Describe one reason why it can be dangerous to drink untreated water.
15.7 Explore More
https://youtu.be/H5zin8jKeT0
Who's at risk for colon cancer? - Amit H. Sachdev and Frank G. Gress, TED-Ed, 2018.
https://youtu.be/V_U6czbDHLE
The surprising cause of stomach ulcers - Rusha Modi, TED-Ed, 2017.
Attributions
Figure 15.7.1
BADAS_Crohn by Dayavathi Ashok and Patrick Kiely/ Journal of medical case reports on Wikimedia Commons is used under a CC BY 2.0 (https://creativecommons.org/licenses/by/2.0) license.
Figure 15.7.2
512px-Ds00070_an01934_im00887_divert_s_gif.webp by Lfreeman04 on Wikimedia Commons is used under a CC BY-SA 4.0 (https://creativecommons.org/licenses/by-sa/4.0) license.
Figure 15.7.3
Colon_diverticulum by melvil on Wikimedia Commons is used under a CC BY-SA 4.0 (https://creativecommons.org/licenses/by-sa/4.0) license.
Figure 15.7.4
H_pylori_ulcer_diagram by Y_tambe on Wikimedia Commons is used under a CC BY-SA 3.0 (http://creativecommons.org/licenses/by-sa/3.0/) license.
Figure 15.7.5
1024px-Endoscopy_training by Yuya Tamai on Wikimedia Commons is used under a CC BY 2.0 (https://creativecommons.org/licenses/by/2.0) license.
Figure 15.7.6
Gastroenteritis_viruses by Dr. Graham Beards [en:User:Graham Beards] at en.wikipedia on Wikimedia Commons is used under a CC BY 3.0 (https://creativecommons.org/licenses/by/3.0) license.
Figure 15.7.7
Giardia_lamblia_SEM_8698_lores by Janice Haney Carr from CDC/ Public Health Image Library (PHIL) ID# 8698 on Wikimedia Commons is in the public domain (https://en.wikipedia.org/wiki/public_domain).
References
Ashok, D., & Kiely, P. (2007). Bowel associated dermatosis - arthritis syndrome: a case report. Journal of medical case reports, 1, 81. https://doi.org/10.1186/1752-1947-1-81
Marshall, B. J., Armstrong, J. A., McGechie, D. B., & Glancy, R. J. (1985). Attempt to fulfil Koch's postulates for pyloric Campylobacter. The Medical Journal of Australia, 142(8), 436–439.
Marshall, B. J., McGechie, D. B., Rogers, P. A., & Glancy, R. J. (1985). Pyloric campylobacter infection and gastroduodenal disease. The Medical Journal of Australia, 142(8), 439–444.
TED-Ed. (2017, September 28). The surprising cause of stomach ulcers - Rusha Modi. YouTube. https://www.youtube.com/watch?v=V_U6czbDHLE&feature=youtu.be
TED-Ed. (2018, January 4). Who's at risk for colon cancer? - Amit H. Sachdev and Frank G. Gress. YouTube. https://www.youtube.com/watch?v=H5zin8jKeT0&feature=youtu.be
Image shows a model of a water molecule. A large central oxygen atom is connected to two adjacent, smaller white hydrogen atoms.
image shows a diagram of the location of each type of tooth on the bottom jaw. Per side, there are three molars at the very back, just in front of the molars there are two submolars per side, and then one canine on each side. At the very front and center of the lower jaw are four incisors.
Image shows a labelled diagram of organs of the head and neck belonging to the respiratory and digestive systems. These include the nasal cavity, the palate, the oral cavity, the lips, the jaw, tongue, pharynx, epiglottis, larynx, and esophagus. The pharynx is of particular note since it is the last space through which food and air travel. The epiglottis is critical in ensuring that food only enters the esophagus of the digestive system and not the larynx of the respiratory system.
What Are You Made of?
Your entire body is made of cells and cells are made of molecules.If you look at your hand, what do you see? Of course, you see skin, which consists of . But what are skin cells made of? Like all living cells, they are made of matter. In fact, all things are made of matter. is anything that takes up space and has mass. Matter, in turn, is made up of chemical substances. A is matter that has a definite composition that is consistent throughout. A chemical substance may be either an element or a compound.
Elements and Atoms
An is a pure substance. It cannot be broken down into other types of substances. Each element is made up of just one type of .
Structure of an Atom
An is the smallest particle of an element that still has the properties of that element. Every substance is composed of atoms. Atoms are extremely small, typically about a ten-billionth of a metre in diametre. However, atoms do not have well-defined boundaries, as suggested by the atomic model shown below.
Every is composed of a central area — called the — and one or more subatomic particles called , which move around the nucleus. The nucleus also consists of subatomic particles. It contains one or more s and typically a similar number of . The number of protons in the nucleus determines the type of element an atom represents. An atom of hydrogen, for example, contains just one proton. Atoms of the same element may have different numbers of neutrons in the nucleus. Atoms of the same element with the same number of protons — but different numbers of neutrons — are called .
Protons have a positive electric charge and neutrons have no electric charge. Virtually all of an atom's mass is in the protons and neutrons in the nucleus. Electrons surrounding the nucleus have almost no mass, as well as a negative electric charge. If the number of protons and electrons in an atom are equal, then an atom is electrically neutral, because the positive and negative charges cancel each other out. If an atom has more or fewer electrons than protons, then it has an overall negative or positive charge, respectively, and it is called an .
The negatively-charged electrons of an atom are attracted to the positively-charged protons in the nucleus by a force called , for which opposite charges attract. Electromagnetic force between protons in the nucleus causes these subatomic particles to repel each other, because they have the same charge. However, the protons and neutrons in the nucleus are attracted to each other by a different force, called , which is usually stronger than the electromagnetic force. Nuclear force repels the positively-charged protons from each other.
Periodic Table of the Elements
There are almost 120 known elements. As you can see in the Periodic Table of the Elements shown below, the majority of elements are metals. Examples of metals are iron (Fe) and copper (Cu). Metals are shiny and good conductors of electricity and heat. Nonmetal elements are far fewer in number. They include hydrogen (H) and oxygen (O). They lack the properties of metals.
The periodic table of the elements arranges elements in groups based on their properties. The element most important to life is carbon (C). Find carbon in the table. What type of element is it: metal or nonmetal?
Compounds and Molecules
A is a unique substance that consists of two or more elements combined in fixed proportions. This means that the composition of a compound is always the same. The smallest particle of most compounds in living things is called a .
Consider water as an example. A molecule of water always contains one atom of oxygen and two atoms of hydrogen. The composition of water is expressed by the chemical formula H2O. A model of a water molecule is shown in Figure 3.2.4.
What causes the atoms of a water molecule to “stick” together? The answer is chemical bonds. A is a force that holds together the atoms of molecules. Bonds in molecules involve the sharing of electrons among atoms. New chemical bonds form when substances react with one another. A is a process that changes some chemical substances into others. A chemical reaction is needed to form a compound, and another chemical reaction is needed to separate the substances in that compound.
3.2 Summary
- All consists of chemical substances. A has a definite composition which is consistent throughout. A chemical substance may be either an element or a compound.
- An is a pure substance that cannot be broken down into other types of substances.
- An is the smallest particle of an element that still has the properties of that element. Atoms, in turn, are composed of subatomic particles, including negative , positive , and neutral . The number of protons in an atom determines the element it represents.
- Atoms have equal numbers of electrons and protons, so they have no charge. Ions are atoms that have lost or gained electrons, and as a result have either a positive or negative charge. Atoms with the same number of protons — but different numbers of neutrons — are called .
- There are almost 120 known elements. The majority of elements are metals. A smaller number are nonmetals. The latter include carbon, hydrogen, and oxygen.
- A compound is a substance that consists of two or more elements in a unique composition. The smallest particle of a compound is called a . Chemical bonds hold together the atoms of molecules. Compounds can form only in chemical reactions, and they can break down only in other chemical reactions.
3.2 Review Questions
- What is an element? Give three examples.
- Define compound. Explain how compounds form.
- Compare and contrast atoms and molecules.
- The compound called water can be broken down into its constituent elements by applying an electric current to it. What ratio of elements is produced in this process?
- Relate ions and isotopes to elements and atoms.
- What is the most important element to life?
- Iron oxide is often known as rust — the reddish substance you might find on corroded metal. The chemical formula for this type of iron oxide is Fe2O3. Answer the following questions about iron oxide and briefly explain each answer.
- Is iron oxide an element or a compound?
- Would one particle of iron oxide be considered a molecule or an atom?
- Describe the relative proportion of atoms in iron oxide.
- What causes the Fe and O to stick together in iron oxide?
- Is iron oxide made of metal atoms, metalloid atoms, nonmetal atoms, or a combination of any of these?
- 14C is an isotope of carbon used in the radiocarbon dating of organic material. The most common isotope of carbon is 12C. Do you think 14C and 12C have different numbers of neutrons or protons? Explain your answer.
- Explain why ions have a positive or negative charge.
- Name the three subatomic particles described in this section.
3.2 Explore More
https://www.youtube.com/watch?v=yQP4UJhNn0I&feature=emb_logo
Just how small is an atom? TED-Ed, 2012
Attributions
Figure 3.2.1
Man Sitting, by Gregory Culmer, on Unsplash, is used under the Unsplash license (https://unsplash.com/license).
Figure 3.2.2
Lithium Atom diagram, by AG Caesar, is used under a CC BY-SA 4.0 (https://creativecommons.org/licenses/by-sa/4.0/deed.en)
Figure 3.2.3
Periodic Table Armtuk3, by Armtuk, is used under a CC BY-SA 3.0 (https://creativecommons.org/licenses/by-sa/3.0/) license.
Figure 3.2.4
Water molecule, by Sakurambo, is released into the public domain (https://en.wikipedia.org/wiki/Public_domain).
References
TED-Ed. (2012, April 16). Just how small is an atom. YouTube. https://www.youtube.com/watch?v=yQP4UJhNn0I&feature=youtu.be
Image shows a freshly baked Steak and Kidney Pie.
